name: dragmap_hashtable
description: Create DRAGEN hashtable for reference genome
keywords:
  - index
  - fasta
  - genome
  - reference
tools:
  - dragmap:
      description: Dragmap is the Dragen mapper/aligner Open Source Software.
      homepage: https://github.com/Illumina/dragmap
      documentation: https://github.com/Illumina/dragmap
      tool_dev_url: https://github.com/Illumina/dragmap#basic-command-line-usage
      licence: ["GPL v3"]
input:
  - meta:
      type: map
      description: |
        Groovy Map containing reference information
        e.g. [ id:'test', single_end:false ]
  - fasta:
      type: file
      description: Input genome fasta file
output:
  - meta:
      type: map
      description: |
        Groovy Map containing reference information
        e.g. [ id:'test', single_end:false ]
  - hashmap:
      type: file
      description: DRAGMAP hash table
      pattern: "*.{cmp,.bin,.txt}"
  - versions:
      type: file
      description: File containing software versions
      pattern: "versions.yml"
authors:
  - "@Emiller88"
maintainers:
  - "@Emiller88"
