Research Object Crate for Multisample Batch Correction with SnapATAC2 and Harmony

Original URL: https://workflowhub.eu/workflows/1078/ro_crate?version=1

This Workflow takes a dataset collection of single-cell ATAC-seq fragments and performs: - preprocessing - filtering - concatenation - dimension reduction - batch correction (with Harmony and optionally Scanorama and MNC-correct) - leiden clustering * new SnapATAC2 version: from 2.5.3 to 2.6.4

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