hackathon

Projet de Hackathon du master AMI2B 2022 - Pipeline d'analyse RNA-Seq écrit en Nextflow

Author

• George
• George-Marchment
• ClemenceS
• ambrebaumann
• Lindsay Goulet
• Lindsay-Goulet
• Ubuntu
• Ambre
• Ubuntu
• Lindsay GOULET

Publisher

https://github.com/

License

MIT

Contents

• main.nf
  Size: 1.536
• run.sh
  Size: 0.33
• Rapport_Final.pdf
  Size: 1314.682
• nextflow.config
  Size: 1.444
• README.md
  Size: 2.693
• workflows/rna-seq.nf
  Size: 3.521
• pictures/paris-saclay.png
  Size: 6.433
• pictures/dag.svg
  Size: 12.195
• modules/concatenateGenome.nf
  Size: 0.874
• modules/diffAnalysis.nf
  Size: 0.967
• modules/genomeIndex.nf
  Size: 1.038
• modules/mappingFastQ.nf
  Size: 1.212
• modules/qualityControl.nf
  Size: 0.854
• modules/downloadGenome.nf
  Size: 0.985
• modules/genomeAnnotations.nf
  Size: 0.894
• modules/counting.nf
  Size: 0.915
• modules/indexBam.nf
  Size: 0.722
• modules/trimming.nf
  Size: 0.949
• modules/downloadFastqFiles.nf
  Size: 0.842
• subworkflows/quality_control_sub.nf
  Size: 1.692
• subworkflows/download_files.nf
  Size: 1.646
• Rscript/analyse.R
  Size: 6.316
• Rscript/metadata.txt
  Size: 0.142