Research Object Crate for MGnify raw reads taxonomic profiling pipeline

The containerised pipeline for profiling shotgun metagenomic data is derived from the [MGnify](https://www.ebi.ac.uk/metagenomics/) pipeline raw-reads analyses, a well-established resource used for analyzing microbiome data. Key components: - Quality control and decontamination - rRNA and ncRNA detection using Rfam database - Taxonomic classification of SSU and LSU regions - Abundance analysis with mOTUs

Author

Ekaterina Sakharova, Martin Beracochea

License

Apache-2.0

Contents