Research Object Crate for scRNAseq_SingleSampleProcessing_STARSolo

Original URL: https://workflowhub.eu/workflows/465/ro_crate?version=1

From the R1 and R2 fastq files of a single samples, make a scRNAseq counts matrix, and perform basic QC with scanpy. Then, do further processing by making a UMAP and clustering. Produces a processed AnnData

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CC-BY-4.0

Contents

Main Workflow: scRNAseq_SingleSampleProcessing_STARSolo
Size: 121325 bytes