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  Created At
  
  Updated At
  
  Workflow type
      Common Workflow Language1
  Submitter
      Camille Juigné1
  Space
      COVID-19 Biohackathon1
  Creator
      Camille Juigné1
  Maturity
      Stable1
  
        
  1
    Workflow visible to you, out of a total of 1
      
      
    Stable
Analysis of variation within individual COVID-19 samples using bowtie2, bwa, fastp, multiqc , picard ,samtools, snpEff Workflow, tools and data are available on https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2/tree/master/Variation This worklow was ported into CWL from a Galaxy Workflow ( https://github.com/galaxyproject/SARS-CoV-2/tree/master/genomics/4-Variation migrated to CWL).

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