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Workflow type
Nextflow1
Tag
covid-191
Submitter
Valentin Tilloy1
Space
Independent Teams1
Maturity
Stable1
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Stable
ASPICov was developed to provide a rapid, reliable and complete analysis of NGS SARS-Cov2 samples to the biologist. This broad application tool allows to process samples from either capture or amplicon strategy and Illumina or Ion Torrent technology. To ensure FAIR data analysis, this Nextflow pipeline follows nf-core guidelines and use Singularity containers.
Availability and Implementation: https://gitlab.com/vtilloy/aspicov
Citation: Valentin Tilloy, Pierre Cuzin, Laura Leroi, Emilie Guérin, ...
Type: Nextflow
Creators: Valentin Tilloy, Pierre Cuzin, Laura Leroi, Patrick Durand, Sophie Alain
Submitter: Valentin Tilloy