Workflows

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Stable

cfDNA-Flow

1. Overview

cfDNA-Flow facilitates the accurate and reproducible analysis of cfDNA WGS data. It offers various preprocessing options to accommodate different experimental setups and research needs in the field of liquid biopsies.

2. Preprocessing options

2.1 Trimming Options

cfDNA-Flow provides the flexibility to either trim or not trim the input reads based on the user's requirements. Trimming removes low-quality bases, which can impact downstream analyses.

2.2 Reference

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Type: Snakemake

Creators: Ivna Ivankovic, Todor Gitchev, Zsolt Balázs

Submitter: Zsolt Balázs

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