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Created At
Updated At
Tool
fastp6
MultiQC6
SRA Software Toolkit6
BWA5
SAMtools5
antiSMASH4
BLAST4
TransDecoder4
UniProt4
gffread3
Bowtie 22
Cufflinks2
tophat22
Vcflib2
cuffdiff1
HISAT21
StringTie1
Unicycler1
VarScan1
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Workflow type
Galaxy21
Tag
covid-1919
Alignment4
Assembly4
RNASEQ4
Annotation3
Galaxy3
INDELs2
SNPs2
Tophat22
GATK41
StringTie1
Unicycler1
VARSCAN21
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Space
COVID-19 Biohackathon21
Maturity
Stable6
Tests
Not available1
21
Workflows visible to you, out of a total of 21
Preprocessing of raw SARS-CoV-2 reads. More info can be found at https://covid19.galaxyproject.org/genomics/
Type: Galaxy
Creator: Dannon Baker, Marius van den Beek, Dave Bouvier, John Chilton, Nate Coraor, Frederik Coppens, Bert Droesbeke, Ignacio Eguinoa, Simon Gladman, Björn Grüning, Delphine Larivière, Gildas Le Corguillé, Andrew Lonie, Nicholas Keener, Sergei Kosakovsky Pond, Wolfgang Maier, Anton Nekrutenko, James Taylor, Steven Weaver
Submitter: Bert Droesbeke
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