3 items tagged with 'manta'.
GermlineStructuralV-nf is a pipeline for identifying structural variant events in human Illumina short read whole genome sequence data. GermlineStructuralV-nf identifies structural variant and copy number events from BAM files using Manta, Smoove, and TIDDIT. Variants are then merged using SURVIVOR, ...
Type: Nextflow
Creators: Georgina Samaha, Marina Kennerson, Tracy Chew, Sarah Beecroft
Submitter: Georgina Samaha
Created: 31st Jan 2023 at 23:40, Last updated: 18th Dec 2023 at 05:36
Stable
StructuralVariants Workflow
Type: Nextflow
Creators: Laura Rodriguez-Navas, Adrián Muñoz-Civico, Daniel López-López
Submitter: Laura Rodriguez-Navas
Created: 9th Sep 2022 at 11:38, Last updated: 16th Sep 2022 at 15:31
Stable
StructuralVariants Workflow
Type: Common Workflow Language
Creators: Laura Rodriguez-Navas, Daniel López-López
Submitter: Laura Rodriguez-Navas
Created: 14th Mar 2022 at 12:07, Last updated: 30th Jun 2022 at 13:00