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Nextflow1
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CIRCexplorer21
circrna1
circRNA_finder1
CIRIquant1
DCC1
differential expression1
find_circ1
MapSplice1
miRanda1
mirna prediction1
Nextflow1
Segemehl1
TargetScan1
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Barry Digby1
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nf-core1
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nf-core1
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Barry Digby1
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Work-in-progress
nf-core/circrna
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
Introduction
nf-core/circrna is a best-practice analysis pipeline for the quantification, miRNA target prediction and differential expression analysis of circular RNAs in paired-end RNA sequencing data.
The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes ...