Nandan Deshpande
SEEK ID: https://workflowhub.eu/people/641
Location: Not known
ORCID:
https://orcid.org/0000-0002-0324-8728
Joined: 20th Dec 2023
Expertise: Not specified
Tools: Not specified
Their tagsRelated items
This is a Nextflow implementaion of the GATK Somatic Short Variant Calling workflow. This workflow can be used to discover somatic short variants (SNVs and indels) from tumour and matched normal BAM files following GATK's Best Practices Workflow. The workflowis currently optimised to run efficiently and at scale on the National Compute Infrastructure, Gadi.
Type: Nextflow
Creators: Nandan Deshpande, Tracy Chew, Cali Willet, Georgina Samaha
Submitter: Georgina Samaha
