Minimap22 fastp6 BWA5 Galaxy5 BCFtools4 FastQC4 MultiQC4 BLAST3 kraken23 Variant Effect Predictor (VEP)3 ChiRA2 Cutadapt2 Konstanz Information Miner (KNIME)2 MaBoSS2 PhysiCell2 R2 seqtk2 Seurat2 Snakemake2 SnpSift2 taxonomy_krona_chart2 VADR2 vardict2 vcfanno2 vcfutils2 AnnotSV1 Biopython1 BlobToolKit1 BRAKER11 BUSCO1 cBioPortal1 CellProfiler1 CNVkit1 COMBAT-TB Workbench1 Delly21 FreeBayes1 funannotate1 GADES1 Galaxy Image Analysis1 GATK1 gblocks1 GetOrganelle1 ggtree1 ImageJ21 iqtree1 lofreq1 MAFFT1 MITOS1 OBITools1 PLINK1 PredPrIn1 protexcluder1 QualiMap1 RepeatMasker1 RepeatModeler1 SAMtools1 scikit-image1 seqkit1 snippy1 STAR1 StringTie1 tb-profiler1 varlociraptor1 VarScan1 More...

Nextflow1 Snakemake1

BGE2 Bioinformatics2 Genomics2 Annotation1 Biodiversity1 BioScanEurope1 DE_NOVO1 ERGA1 Genome assembly1 Nextflow1 rna-seq1 sequence annotation1 Transcriptomics1 Workflows1 More...

Tom Brown1 Oliver White1

Bioinformatics Laboratory for Genomics and Biodiversity (LBGB)1 NHM Clark group1

Independent Teams2 ERGA1

Phuong Doan1

Genomics2 Biodiversity1 Gene structure1 Gene transcripts1 Sequence assembly1

Phylogenetic inference1 Sequence annotation1 Sequence assembly1 Sequencing quality control1

Stable2 Work-in-progress3