Genome Data Compression Team
OverviewWe are dedicated to designing efficient genome data compression algorithms and developing related tools to address the challenges of large-scale genome data storage and transmission. Our goal is to reduce data storage costs and improve data processing efficiency through advanced technology, thereby advancing genomic research.
Space: GenomeDataCompression
SEEK ID: https://workflowhub.eu/projects/245
Public web page: Not specified
Organisms: No Organisms specified
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Team created: 17th May 2024
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Teams: Genome Data Compression Team
Organizations: Shenzhen University
https://orcid.org/0009-0007-9672-6728
GSC (Genotype Sparse Compression)
Genotype Sparse Compression (GSC) is an advanced tool for lossless compression of VCF files, designed to efficiently store and manage VCF files in a compressed format. It accepts VCF/BCF files as input and utilizes advanced compression techniques to significantly reduce storage requirements while ensuring fast query capabilities. In our study, we successfully compressed the VCF files from the 1000 Genomes Project (1000Gpip3), consisting of 2504 samples and 80 ...
GSC (Genotype Sparse Compression)
Genotype Sparse Compression (GSC) is an advanced tool for lossless compression of VCF files, designed to efficiently store and manage VCF files in a compressed format. It accepts VCF/BCF files as input and utilizes advanced compression techniques to significantly reduce storage requirements while ensuring fast query capabilities. In our study, we successfully compressed the VCF files from the 1000 Genomes Project (1000Gpip3), consisting of 2504 samples and 80 ...
