2 items tagged with 'RDF'.
Expertise: Data Management, Database Development, Semantic Web, Ontology, Knowledge Graph
Work-in-progress
Workflow for converting (genome) annotation tool output into a GBOL RDF file (TTL/HDT) using SAPP
Current formats / tools:
- EMBL format
- InterProScan (JSON/TSV)
- eggNOG-mapper (TSV)
- KoFamScan (TSV)
git: https://gitlab.com/m-unlock/cwl
SAPP (Semantic Annotation Platform with Provenance):
https://gitlab.com/sapp
https://academic.oup.com/bioinformatics/article/34/8/1401/4653704
Created: 1st Oct 2024 at 14:46, Last updated: 3rd Oct 2024 at 10:43