3 items tagged with 'RDF'.
    
      
    Expertise: Data Management, Database Development, Semantic Web, Ontology, Knowledge Graph
    Stable
WorkflowHub Knowledge Graph
A tool to generate a knowledge graph from a source of RO Crates. By default, this tool sources and generates an RDF graph of crates from WorkflowHub.
Type: Snakemake
Creators: Alexander Hambley, Oliver Woolland, Eli Chadwick, Volodymyr Savchenko, José Mª Fernández, Stian Soiland-Reyes
Submitter: Eli Chadwick
            Created: 3rd Oct 2025 at 14:20, Last updated: 3rd Oct 2025 at 14:54
          
        
    Work-in-progress
Workflow for converting (genome) annotation tool output into a GBOL RDF file (TTL/HDT) using SAPP
Current formats / tools:
- EMBL format
- InterProScan (JSON/TSV)
- eggNOG-mapper (TSV)
- KoFamScan (TSV)
git: https://gitlab.com/m-unlock/cwl
SAPP (Semantic Annotation Platform with Provenance): 
https://gitlab.com/sapp 
https://academic.oup.com/bioinformatics/article/34/8/1401/4653704
            Created: 1st Oct 2024 at 14:46, Last updated: 3rd Oct 2024 at 10:43
          
        
 https://orcid.org/0000-0003-4715-9070
 https://orcid.org/0000-0003-4715-9070







