3 items tagged with 'VARSCAN2'.
Detects SNPs and short INDELs.
Creator: Ambarish Kumar
Submitter: Ambarish Kumar
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Detects SNPs and INDELs using VARSCAN2.
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Author: AMBARISH KUMAR er.ambarish@gmail.com; ambari73_sit@jnu.ac.in
This is a proposed standard operating procedure for genomic variant detection using VARSCAN.
It is hoped to be effective and useful for getting SARS-CoV-2 genome variants.
It uses Illumina RNASEQ reads and genome sequence.
