Workflows
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Query
Created At
Updated At
Tool
fastp3
MultiQC3
QualiMap3
BWA2
SAMtools2
iVar1
BCFtools1
COMBAT-TB Workbench1
kraken21
lofreq1
snippy1
snpEff1
tb-profiler1
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Workflow type
Galaxy6
Topic annotations
Genetic variation1
Infectious disease1
Microbiology1
Public health and epidemiology1
Sequence assembly1
Maturity
Stable1
6
Workflows visible to you, out of a total of 6
Find and annotate variants in ampliconic SARS-CoV-2 Illumina sequencing data and classify samples with pangolin and nextclade
Variant calling and consensus sequence generation for batches of Illumina PE sequenced viruses with uncomplicated and stable genome structure (like e.g. Morbilliviruses).
Stable
Predict variants and drug resistance from M. tuberculosis sequence samples (Illumina)
SARS-CoV-2 variant prediction using Read It And Keep, fastp, bbmap and iVar
