SARS-CoV-2 PostProcessing
Version 1

Workflow Type: Galaxy
No description specified

Inputs

ID Name Description Type
Aligned reads (BAM) Aligned reads (BAM) n/a
  • File[]
Amplicons Amplicons n/a
  • File
Consensus Genomes Consensus Genomes n/a
  • File[]
Reference Genome Reference Genome n/a
  • File
SARS-CoV-2 Annotation (GFF3) SARS-CoV-2 Annotation (GFF3) n/a
  • File

Steps

ID Name Description
5 Nextclade toolshed.g2.bx.psu.edu/repos/iuc/nextclade/nextclade/2.7.0+galaxy0
6 JBrowse toolshed.g2.bx.psu.edu/repos/iuc/jbrowse/jbrowse/1.16.11+galaxy1

Version History

Version 1 (earliest) Created 28th Jun 2023 at 13:12 by Peter van Heusden

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Open master 26a2ca1
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Views: 3116   Downloads: 229   Runs: 0

Created: 28th Jun 2023 at 13:12

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Total size: 11.2 KB
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