INFRAFRONTIER workflows
OverviewSpace: Independent Teams
SEEK ID: https://workflowhub.eu/projects/68
Public web page: Not specified
Organisms: No Organisms specified
WorkflowHub PALs: No PALs for this Team
Team created: 13th Oct 2021
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Teams: INFRAFRONTIER workflows, INFRAFRONTIER GmbH
Organizations: INFRAFRONTIER GmbH
Teams: INFRAFRONTIER workflows
Organizations: INFRAFRONTIER GmbH
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Gene similariy anaylsis across physiological systems in IMPC phenotype data
A Jupyter Notebook tool for analysing user specified genes across the different physiological systems in IMPC data.
Input
The tool takes as input a list of gene ids (MGI ids or Gene Symbol ids). The elemnts in the list could be separated by a comma, semicolumn, tab or newline.
Operation
The program will create an heatmap representing the number of phenotypes and the mp term list for each gene contained in ...
Phenotype similarity analysis
A Jupyter Notebook for analyzing phenotyping similarities across user specified genes. Phenotypes are retrieved from the MGI resource
Input
The tool takes as input a list of gene ids (MGI ids or Gene Symbol ids). The elemnts in the list could be separated by a comma, semicolumn, tab or newline.
Operation
The Notebook will create a table where row and columns names are the Gene Symbols of the input elements and each cell will contain the name of the ...
