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Independent Teams296 eFlows4HPC57 COVID-19 Biohackathon22 ELIXIR22 Australian BioCommons20 A Digital Twin for GEOphysical extremes (DT-GEO)17 Galaxy12 Biodiversity Genomics Europe (BGE)11 ERGA8 EOSC-Life7 BioExcel6 HoloFood6 EIRENE-CZ6 nf-core5 DISSCo - Distributed System of Scientific Collections5 BioDT4 Sanger Tree of Life4 BeYond-COVID (BY-COVID)3 ELIXIR Belgium3 HELIPORT3 AI4Life Space3 Molecular Property Diagnostic Suite2 Proteomics CEITEC2 Hiroshima workflow community2 EOSC-Life-WP61 Harvard FASRC1 JKU 1 NTVy's WorkflowHub1 IRRI-Bioinformatics1 Coupled Catchment Lake Modelling1 AquaINFRA1 GenomeDataCompression1 WGGC1 IKIM 16S Analysis1 Workflow Repository Analysis: Early Design Insights1 MAXOMOD1 NkuyfqLab_Space1 More...

COMPSs Tutorials51 IBISBA Workflows22 GalaxyProject SARS-CoV-216 EuroScienceGateway14 Galaxy Training Network12 MGnify11 EJPRD WP13 case-studies workflows11 usegalaxy-eu10 Euro-BioImaging10 Workflows and Distributed Computing9 eFlows4HPC general9 WP5 - Volcanoes8 Biodiversity Genomics Europe (general)8 Snakemake-Workflows7 ERGA Assembly7 WP7 - Earthquakes7 Scipion CNB7 BioBB Building Blocks6 UX trial team6 Australian BioCommons6 ELIXIR Training6 HoloFood at MGnify6 EGA6 CWL workflow SARS-CoV-25 nf-core5 QCIF Bioinformatics5 SeBiMER5 OME5 OpenEBench5 Specimen Data Refinery5 Defragmentation TS5 NBIS5 ELIXIR Proteomics5 NGFF Tools5 Pillar II: Climate5 Pillar III: Urgent computing for natural hazards5 ERGA Annotation5 RECETOX SpecDatRI5 nf-core viralrecon4 SARS-CoV-2 Data Hubs4 EOSC-Life WP34 Sydney Informatics Hub4 Common Workflow Language (CWL) community4 Galaxy Australia4 CO2MICS Lab4 Vertebrate Genomes Pipelines in Galaxy4 WP6 - Tsunamis4 WP8 - Anthropogenic geophysical extremes4 Tree of Life Genome Assembly4 Tree of Life Genome Analysis4 Integrated and Urban Plant Pathology Laboratory3 EOSC-Life - Demonstrator 7: Rare Diseases3 iPC: individualizedPaediatricCure3 ODA3 TransBioNet3 FAIR Computational Workflows3 Medizinisches Proteom-Center, Medical Bioinformatics3 usegalaxy.be workflows3 Air Quality Prediction3 TRE-FX3 BioDT Use Case 4.1.3.1 Invasive species3 BioDT additional pipelines3 BSC-CES3 Metabolomics-Reproducibility3 Helmholtz Scientific Project Workflow Platform3 BY-COVID Baseline Use Case: SARS-CoV-2 Vaccine(s) effectiveness in preventing SARS-CoV-2 infection3 Pillar I: Manufacturing3 BY-COVID (general)3 AI4Life OC3 ELIXIR Tools platform3 V-Pipe2 ELIXIR Cloud & AAI2 UNLOCK2 Galaxy Climate2 PNDB2 Intergalactic Workflow Commission (IWC)2 MOLGENIS2 Pawsey Supercomputing Research Centre2 Janis2 MAB - ATGC2 Applied Computational Biology at IEG/HMGU2 INFRAFRONTIER workflows2 RECETOX2 CINECA2 Pitagora-Network2 AGRF BIO2 EU-Openscreen2 X-omics2 Cluster Emergent del Cervell Humà2 CAPSID2 Seq4AMR2 KircherLab2 GEMS at MLZ2 Computational Science at HZDR2 BioDT Use Case 4.1.1.2 Ecosystem services2 BioDT Use Case 4.1.1.1 Biodiversity dynamics2 CSFG2 Polygenic Score Catalog2 EMBL-CBA2 EBP-Nor2 Bioinformatics Laboratory for Genomics and Biodiversity (LBGB)2 MPDS Covid192 Nextflow4Metabolomics2 Proteomics CEITEC2 Institute for Human Genetics and Genomic Medicine Aachen2 ELIXIR Metabolomics2 ErasmusMC Clinical Bioinformatics2 bonohulab2 Ewastools1 Test team1 NMR Workflow1 NanoGalaxy1 IMBforge1 COVID-19 PubSeq: Public SARS-CoV-2 Sequence Resource1 LBI-RUD1 Nick-test-team1 Italy-Covid-data-Portal1 lmjxteam21 virAnnot pipeline1 Ay Lab1 EOSC-Life-WP6-Demos1 Harkany Lab1 BioExcel Best Practice Guides1 Testing1 IAA-CSIC1 Melbourne Data Analytics Platform (MDAP)1 Probabilistic graphical models1 GenX1 IPK BIT1 Harvard University FAS Research Computing1 FAME1 CHU Limoges - UF9481 Bioinformatique / CNR Herpesvirus1 Quadram Institute Bioscience - Bioinformatics1 HecatombDevelopment1 Institute of Human Genetics1 Testing RO Crates1 Test Team1 Bioinformatics and Biostatistics (BIO2 ) Core1 VIB Bioinformatics Core1 CRC Cohort1 ICAN1 MustafaVoh1 Single Cell Unit1 CO-Graph1 emo-bon1 TestEMBL-EBIOntology1 Toxicology community1 Workflows Australia1 Gyn Department1 ELIXIR Belgium1 URGI1 Size Inc1 GA-VirReport Team1 The Boucher Lab1 pyiron1 Edinburgh Genomics1 Phytoplankton Analysis1 KTest1 Workflow registry test1 Read2Map1 SKM31 ParslRNA-Seq: an efficient and scalable RNAseq analysis workflow for studies of differentiated gene expression1 de.NBI Cloud1 Meta-NanoSim1 ILVO Plant Health1 EMERGEN-BIOINFO1 Apis-wings1 BCCM_ULC1 Dessimoz Lab1 TRON gGmbH1 Big data in biomedicine1 BioDT Use Case 4.1.2.2 DNA detected biodiversity, poorly known habitats1 BioDT Use Case 4.1.2.1 Crop wild relatives and genetic resources for food security1 BioDT Use Case 4.1.3.2 Endangered species1 BioDT Use Case 4.1.4.1 Disease outbreaks1 BioDT Use Case 4.1.4.2 Pollinators1 MISTIC1 Guigó lab1 Statistical genetics1 Delineating Regions-of-interest for Mass Spectrometry Imaging by Multimodally Corroborated Spatial Segmentation1 WES1 Bioinformatics Unit @ CRG1 Bioinformatics Innovation Lab1 Black Ochre Data Labs1 IRRI Bioinformatics Group1 Zavolan Lab1 Team Cardio1 Bioinformatics workflows for life science1 Workflows for geographic science1 Pacific-deep-sea-sponges-microbiome1 SNAKE1 Katdetectr1 INFRAFRONTIER GmbH1 PerMedCoE1 Lake Erken modelling setup1 EOSC-Life WP3 OC Team, cross RI project1 ANSES-Ploufragan1 SANBI Pathogen Bioinformatics1 Biodata Analysis Group1 DeSci Labs1 Erasmus MC - Viroscience Bioinformatics1 ARA-dev1 Mendel Centre for Plant Genomics and Proteomics1 Metagenomic tools1 WorkflowEng1 bpm1 scNTImpute1 Systems Biotechnology laboratory1 Cimorgh IT solutions1 MLme: Machine Learning Made Easy1 Hurwitz Lab1 Dioscuri TDA1 System Biotechnology laboratory1 yPublish - Bioinfo tools1 NIH CFDE Playbook Workflow Partnership1 MMV-Lab1 Evaluation of Swin Transformer and knowledge transfer for denoising of super-resolution structured illumination microscopy data1 multi-analysis dFC1 CholGen1 RNA group1 Plant Genomes Pipelines in Galaxy1 Pathogen Genomic Laboratory1 Chemical Data Lab1 JiangLab1 Pangenome database project1 HP2NET - Framework for construction of phylogenetic networks on High Performance Computing (HPC) environment1 Center for Open Bioimage Analysis1 Building spatio-temporal workflows in Galaxy1 Generalized Open-Source Workflows for Atomistic Molecular Dynamics Simulations of Viral Helicases1 Historical DNA genome skimming1 MPDS1 QCDIS1 Peter Menzel's Team1 NHM Clark group1 ESRF Workflow System (Ewoks)1 Kalbe Bioinformatics1 GBCS1 CEMCOF1 Jackson Laboratory NGS-Ops1 Schwartz Lab1 BRAIN - Biomedical Research on Adult Intracranial Neoplasms1 Cancer Therapeutics and Drug Safety1 Genome Data Compression Team1 Deepdefense1 Mid-Ohio Regional Planning Commission1 MGSSB1 FengTaoSMU1 Plant-Food-Research-Open1 KrauthammerLab1 Geo Workflows1 grassland pDT1 FunGIALab1 WGGC1 CRIM - Computer Research Institute of Montréal1 Medvedeva Lab1 16S rRNA Analysis1 Metagenlab1 FAIR-EASE1 Protein-protein and protein-nucleic acid binding site prediction research1 Culhane Lab1 IDUN - Drug Delivery and Sensing1 Edge Computing DAG Task Scheduling Research Group1 Stratum corneum nanotexture feature detection using deep learning and spatial analysis: a non-invasive tool for skin barrier assessment1 COPO1 Taudière group1 Mining Workflow Repositories for Insights about the Early Phases of Workflow Design1 interTwin1 MAXOMOD1 NkuyfqLab1 fluid flow modeling1 EnrichDO1 More...

Barcelona Supercomputing Center (BSC-CNS)27 Unspecified22 EMBL-EBI17 The University of Manchester15 Universitat Politècnica de Catalunya - BarcelonaTech (UPC)12 Istituto Nazionale di Geofisica e Vulcanologia (INGV)11 Spanish National Research Council (CSIC)10 Euro-BioImaging10 Australian BioCommons9 ELIXIR Belgium8 EJP-RD8 Erasmus University Medical Centre7 European Galaxy Team7 INRAe6 IFREMER6 EGA6 Albert-Ludwigs-Universität Freiburg5 QCIF5 Centre National de la Recherche Scientifique (CNRS)5 RECETOX5 Galaxy5 NBIS – National Bioinformatics Infrastructure Sweden5 Masaryk University5 IRISA4 French Museum of Natural History4 University of Melbourne4 The University of Sydney4 Wellcome Sanger Institute4 SIB - Swiss Institute of Bioinformatics3 University of Bradford3 Liege university3 Maastricht University3 MMODA3 Harvard University3 The Natural History Museum London3 VIB3 Helmholtz-Zentrum Dresden - Rossendorf3 Geosciences Barcelona (GEO3BCN-CSIC)3 European Molecular Biology Laboratory3 JNU - School of Computational and Integrative Sciences (SC&IS)2 Earlham Institute2 UNLOCK2 IISER, Mohali2 Institute for Research in Biomedicine (IRB)2 Pawsey Supercomputing Centre2 Medical University of Vienna2 University Medical Center Groningen2 University of Basel2 University of Duisburg-Essen2 Biomedical Research Foundation (BRFAA) of the Academy of Athens2 Helmholtz Zentrum München2 INFRAFRONTIER GmbH2 University of Dundee2 ELIXIR-UK2 The University of Melbourne2 Medical Proteome Center2 Fraunhofer Institute for Translational Medicine and Pharmacology ITMP2 X-omics2 University of Florida2 EMBL2 CNRS - Centre Est2 ELIXIR2 National Laboratory of Scientific Computing2 Berlin Institute of Health at Charité - Universitätsmedizin Berlin2 University of Lausanne2 Helmholtz Zentrum Hereon2 Sciensano2 IZW2 Open Microscopy Enronment (OME)2 ETH Zürich2 Mondaic AG2 Genoscope2 University of Nottingham2 Fondazione Centro Euro-Mediterraneo sui Cambiamenti Climatici (CMCC)2 Naturalis Biodiversity Center2 EPFL2 Norwegian Geotechnical Institute2 CSIR-North East Institute of Science and Technology2 ai4life2 BIOPOLIS Association (BIOPOLIS-CIBIO)2 University Hospital Aachen2 Hiroshima University2 BC Centre for Disease Control1 Institut Pasteur1 CRS41 CIRMMP1 SciLifeLab1 gx-climate1 Institute of Molecular Biology1 VU Amsterdam1 LBI-RUD1 ELIXIR-IT1 lmjxteam21 Bots1 La Jolla Institute of Immunology1 ff1 Peter MacCallum Cancer Centre1 Leiden University Medical Center1 GenX1 IPK Gatersleben1 e-NIOS1 FAME1 CHU Limoges1 Quadram Institute Bioscience1 Washington University in St. Louis1 University of Queensland1 FCBG1 Wellcome-MRC Institute of Metabolic Science1 Institut du thorax1 Shri Vinoba Bhave Civil Hospital1 National University of Ireland, Galway1 BSRC Alexander Fleming1 CO-Graph1 IMBBC-HCMR1 University of Tartu1 Database Center for Life Science1 Johannes Kepler University1 AGRF1 university of manchester1 Size1 Queensland university of Technology1 Max-Planck-Institut für Eisenforschung1 University of Edinburgh1 Penn State University1 Medical Research Council Brain Network Dynamics Unit at the University of Oxford Nuffield Department of Clinical Neurosciences1 Defragmentation TS1 Hubrecht Institute1 Italian National Research Council1 University of Science, HCMVNU1 University of Illinois at Urbana-Champaign1 Texas A&M University1 The Open University1 de.NBI Cloud1 BC Cancer Genome Sciences Centre1 Institute for Agricultural, Fisheries and Food Research (ILVO)1 CNRS1 University of Agriculture in Krakow1 BCCMULC1 TRON1 Helmholtz-Zentrum Dresden-Rossendorf1 TUM - Technical University of Munich1 UK Centre for Ecology & Hydrology1 metagenome-workflows1 Inria1 Centre for Genomic Regulation (CRG)1 Universitat de Barcelona (UB)1 Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences1 Oak Ridge National Laboratory1 Centre for Genomic Regulation1 Pondicherry University1 Telethon Kids Institute1 International Rice Research Institute1 University of Southern Denmark1 Friedrich Schiller University1 Centenary Institute1 Merck KGaA1 CNIC1 Concordia University CSFG1 Leibniz Institute for Zoo and Wildlife Research1 German Cancer Research Center (DKFZ)1 University of Córdoba1 Biocampus1 German BioImaging1 Leibniz Institute of Plant Biochemistry1 CCMAR1 Uppsala University1 EOSC-Life1 French Agency for Food, Environmental and Occupational Health & Safety (Ploufragan-Plouzané-Niort Laboratory)1 SANBI, University of the Western Cape1 Institute of Applied Biosciences, Centre of Research and Technology, Hellas (INAB|CERTH)1 Mount Sinai1 Kyoto University1 DeSci Labs1 Adam Mickiewicz University1 ACC Cyfronet AGH1 University of Cambridge1 The North China University of Technology1 Yunnan Normal University1 cimorgh IT1 CNAG1 University of Bern1 The University of Arizona1 Mathematical Institute Polish Academy of Sciences1 yPublish1 Leibniz-Institut für Analytische Wissenschaften - ISAS - e.V.1 University of Bergen1 Bielefeld university of applied sciences and arts1 University of Oslo1 McGill University1 nf-core1 CholGen1 IBP1 CMB genomics1 Shandong Academy of Agricultural Sciences1 Institut National de Recherche Biomédicale1 Department of Physical Chemistry, Faculty of Science, Palacký University Olomouc1 National Libarary of Medicine1 Center for Open Bioimage Analysis1 Applied Omics Wóycicki1 Universitat Rovira i Virgili1 ESI group1 University of Amsterdam1 University of Potsdam1 Labor Berlin1 European Synchrotron Radiation Facility (ESRF)1 Helmholtz-Centre for Environmental Research (UFZ)1 The Jackson Laboratory1 Telespazio UK1 University Health Network1 Leiden University1 Shenzhen University1 Indian Institute of Technology (BHU) Varanasi1 Mid-Ohio Regional Planning Commission1 CEITEC1 Yonsei university1 Southern Medical University, China1 Plant & Food Research1 University of Zurich1 Oklahoma State University1 Environment Agency Austria1 CNB1 CRIM1 Moscow Institute of Physics and Technology1 Metagenlab1 University Hospital Essen, Institute for Artificial Intelligence in Medicine1 CHUV IMUL1 Shandong University1 INMI1 University of Limerick1 Danmarks Tekniske Universitet1 Service computing center for DAG scheduling1 EGI Foundation1 Huadong Research Institute for Medicine and Biotechniques1 University of Bologna1 Harbin Medical University1 SSC1 Lawrence Livermore National Laboratory1 Ohio Supercomputer Center1 SAIC1 More...

Spain66 United Kingdom57 Germany53 France35 Australia29 Italy24 Netherlands24 United States20 Belgium16 Switzerland16 China13 Czechia10 India9 Sweden7 Canada6 Austria5 Norway5 Japan4 Poland4 Afghanistan3 Brazil3 Denmark3 Greece3 Ireland2 Portugal2 Congo, The Democratic Republic of the1 Estonia1 Iran1 Kenya1 South Korea1 New Zealand1 Philippines1 Russian Federation1 Vietnam1 South Africa1 More...

Bioinformatics43 Scientific workflow developement18 Software Engineering16 Data Management11 Metagenomics11 Genomics10 Machine Learning10 Computer Science10 Workflows8 Cheminformatics7 NGS7 Systems Biology6 AI6 Microbiology5 Molecular Biology5 Python5 High Performance Computing5 Biochemistry4 R4 Bioengineering4 Biostatistics3 Metabarcoding3 phylogenomics3 image analysis3 high-performance computing3 evolution3 Genetics2 Mathematical Modelling2 Metabolomics2 Computer Aided Design2 amplicon analysis2 Database Development2 phylogenetics2 astronomy2 Distributed Computing2 Proteomics1 Synthetic Biology1 Retrosynthesis1 Neuroscience1 algorithm1 Mass Spectrometry Imaging1 bash1 Ecophysiology1 Molecular Modelling1 Biomolecular Dynamics Simulations1 Protein Structural Alignment1 Plant Sciences1 WDL1 Lipidomics1 workflow managers1 open source1 fuzzy logic1 graphs1 Limnology1 numerical methods1 Geophysics1 Probabilistic Inversion1 Theoretical Seismology1 Programming Models1 Provenance1 Semantic Web1 Ontology1 Knowledge Graph1 Grid Computing1 Bioimage1 Reproducible Science1 ARD (Analysis Ready Data)1 Data Quality1 Space Industry1 Geospatial1 Computer Vision1 Traslational Research1 Agronomy1 More...

Python34 Workflows22 R20 Jupyter notebook12 Transcriptomics10 Databases10 Nextflow10 Galaxy8 Genomics7 CWL7 Snakemake7 Machine Learning6 Web services5 nf-core5 Molecular Biology4 PCR4 Conda4 Mathematical Modelling3 Single Cell analysis3 Java3 Perl3 C/C++3 Git3 Genetic analysis2 Mass spectrometry2 Web2 Microbiology1 Computational and theoretical biology1 Proteomics1 Metabolomics1 Virology1 SBML1 Matlab1 rtPCR1 Microarray analysis1 Chromatography1 Cytoscape1 Roddy1 COMPSs1 Napari1 MIAPPE1 WDL1 Autosubmit1 Cylc1 ecFlow1 C1 C++1 SPARQL1 RDF1 OWL1 RML1 ShEx1 Parsl1 OmpSs1 OpenCL1 OGC1 Animal models1 More...