Teams: Cimorgh IT solutions
Organizations: cimorgh IT
Expertise: Bioinformatics, Genomics, Metagenomics, Microbiology, NGS, Python, R, bash, WDL
Tools: Mathematical Modelling, R, WDL
Expertise: Bioinformatics, Metabarcoding, Metagenomics, Microbiology
Expertise: phylogenomics, phylogenetics, evolution, Microbiology, numerical methods
Hi! I'm Russell.
I'm a microbiologist who uses graph theory and machine learning to study the relationships that bacteria and archaea form with their host organisms, and lately giant viruses and their hosts. Or, I'm a computer scientist who builds software that uses concepts from evolution to extract knowledge about ecology from large datasets. Or, I'm a data scientist who uses Python to explore biological systems. Or, I'm a physicist that went rouge and defected to the squishy side of science. ...
Teams: Galaxy Training Network
Organizations: Erasmus University Medical Centre
https://orcid.org/0000-0003-3803-468XExpertise: Genomics, amplicon analysis, Microbiology
Tools: Galaxy
Post-doc at ErasmusMC, Galaxy Training Network (GTN) Lead
Expertise: Bioinformatics, Genomics, Metagenomics, Data Management
Tools: CWL, Jupyter notebook, Nextflow, Molecular Biology, Workflows, Microbiology, Transcriptomics, Perl, Python, R
Expertise: Metagenomics, amplicon analysis, Microbiology, Systems Biology
Tools: CWL
I am a bioinformatician working on microbial ecology and ecosystem functioning at the microbial dimension.