WorkflowHub

4 items tagged with 'Perl'.

People (3)
Workflows (1)

Juan Caballero

Teams: MGnify

Organizations: EMBL-EBI

https://orcid.org/0000-0002-6160-3644

Expertise: Bioinformatics, Genomics, Metagenomics, Data Management

Tools: CWL, Jupyter notebook, Nextflow, Molecular Biology, Workflows, Microbiology, Transcriptomics, Perl, Python, R

Stephen Moss

Teams: Not specified

Organizations: Not specified

https://orcid.org/0000-0002-1399-293X

Expertise: Bioinformatics, Computer Science, Data Management, Genetics, Genomics, Machine Learning, Metagenomics, NGS, Scientific workflow developement, Software Engineering

Tools: Databases, Galaxy, Genomics, Jupyter notebook, Machine Learning, Nextflow, nf-core, PCR, Perl, Python, R, rtPCR, Snakemake, Transcriptomics, Virology, Web, Web services, Workflows

Dad, husband and PhD. Scientist, technologist and engineer. Bibliophile. Philomath. Passionate about science, medicine, research, computing and all things geeky!

Ivan Topolsky

Teams: V-Pipe

Organizations: SIB - Swiss Institute of Bioinformatics

https://orcid.org/0000-0002-7561-0810

Expertise: Bioinformatics, Software Engineering

Tools: Workflows, C/C++, Perl

Medical doctor and bioinformatician

Developer from the Swiss Institute of Bioinformatics (SIB) Working at the Computational Biology Group (CBG) of ETH Zurich.

Diplom in Medicine. MSc in Bioinformatics and Proteomics.

I am also a ski teacher as a hobby.

ARA (Automated Record Analysis)

ARA-dev

Stable

ARA (Automated Record Analysis) : An automatic pipeline for exploration of SRA datasets with sequences as a query

Requirements

Docker
Please checkout the Docker installation guide.

Mamba package manager
Please checkout the mamba or micromamba official installation guide.
We prefer mamba over conda since it is faster and uses ...

Type: Perl

Creators: Anand Maurya, Maciej Szymanski, Wojciech Karlowski

Submitter: Anand Maurya

DOI: 10.48546/workflowhub.workflow.546.1

Created: 31st Jul 2023 at 13:44, Last updated: 31st Jul 2023 at 13:49