2 items tagged with 'Reviewed'.
Associated Tutorial
This workflows is part of the tutorial Assembly of the mitochondrial genome from PacBio HiFi reads, available in the GTN
Features
- Includes Galaxy Workflow Tests
Thanks to...
Workflow Author(s): VGP, Galaxy
**Tutorial ...
Created: 2nd Jun 2025 at 11:02
Contiging Solo w/HiC:
Generate phased assembly based on PacBio Hifi Reads using HiC data from the same individual for phasing.
Inputs
- Hifi long reads [fastq]
- HiC forward reads (if multiple input files, concatenated in same order as reverse reads) [fastq]
- HiC reverse reads (if multiple input files, concatenated in same order as forward reads) [fastq]
- K-mer database [meryldb]
- Genome profile summary generated by Genomescope [txt]
- Name of first assembly
- Name of second assembly ...
Created: 4th Nov 2023 at 03:01, Last updated: 26th Mar 2025 at 10:06