MaxQuant MSstatsTMT Training 1.0
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Run on GalaxyMaxQuant and MSstats for the analysis of TMT data
Associated Tutorial
This workflows is part of the tutorial MaxQuant and MSstats for the analysis of TMT data, available in the GTN
Thanks to...
Tutorial Author(s): Klemens Fröhlich, Melanie Föll, Matthias Fahrner
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Experimental design template | #main/Experimental design template | n/a |
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| Input Dataset Collection | #main/Input Dataset Collection | n/a |
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| MSstats annotation file | #main/MSstats annotation file | n/a |
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Steps
| ID | Name | Description |
|---|---|---|
| 3 | MaxQuant | toolshed.g2.bx.psu.edu/repos/galaxyp/maxquant/maxquant/1.6.17.0+galaxy2 |
| 4 | MSstatsTMT | toolshed.g2.bx.psu.edu/repos/galaxyp/msstatstmt/msstatstmt/2.0.0+galaxy0 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| _anonymous_output_10 | #main/_anonymous_output_10 | n/a |
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| _anonymous_output_11 | #main/_anonymous_output_11 | n/a |
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| _anonymous_output_12 | #main/_anonymous_output_12 | n/a |
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| _anonymous_output_4 | #main/_anonymous_output_4 | n/a |
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| _anonymous_output_5 | #main/_anonymous_output_5 | n/a |
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| _anonymous_output_6 | #main/_anonymous_output_6 | n/a |
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| _anonymous_output_7 | #main/_anonymous_output_7 | n/a |
|
| _anonymous_output_8 | #main/_anonymous_output_8 | n/a |
|
| _anonymous_output_9 | #main/_anonymous_output_9 | n/a |
|
Version History
master
Creators and Submitter
Views: 47 Downloads: 4 Runs: 0
Created: 2nd Jun 2025 at 10:51
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Organizations: Galaxy
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