Workflow7: Beta Diversity [Galaxy Training: 16S Microbial Analysis With Mothur] 1.0
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Run on Galaxy16S Microbial Analysis with mothur (short)
Associated Tutorial
This workflows is part of the tutorial 16S Microbial Analysis with mothur (short), available in the GTN
Thanks to...
Workflow Author(s): Saskia Hiltemann
Tutorial Author(s): Saskia Hiltemann, Bérénice Batut, Dave Clements
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Shared file from Make.shared | #main/Shared file from Make.shared | n/a |
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| Sub.sample shared | #main/Sub.sample shared | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 2 | Dist.shared | toolshed.g2.bx.psu.edu/repos/iuc/mothur_dist_shared/mothur_dist_shared/1.39.5.0 |
| 3 | Collapse Collection | toolshed.g2.bx.psu.edu/repos/nml/collapse_collections/collapse_dataset/4.2 |
| 4 | Heatmap.sim | toolshed.g2.bx.psu.edu/repos/iuc/mothur_heatmap_sim/mothur_heatmap_sim/1.39.5.0 |
| 5 | Tree.shared | toolshed.g2.bx.psu.edu/repos/iuc/mothur_tree_shared/mothur_tree_shared/1.39.5.0 |
| 6 | Venn | toolshed.g2.bx.psu.edu/repos/iuc/mothur_venn/mothur_venn/1.39.5.0 |
| 7 | Newick Display | toolshed.g2.bx.psu.edu/repos/iuc/newick_utils/newick_display/1.6+galaxy1 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| _anonymous_output_1 | #main/_anonymous_output_1 | n/a |
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| _anonymous_output_2 | #main/_anonymous_output_2 | n/a |
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| _anonymous_output_3 | #main/_anonymous_output_3 | n/a |
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| _anonymous_output_4 | #main/_anonymous_output_4 | n/a |
|
| _anonymous_output_5 | #main/_anonymous_output_5 | n/a |
|
Version History
master
Creators and Submitter
Views: 1364 Downloads: 180 Runs: 0
Created: 2nd Jun 2025 at 10:52
Tags AttributionsNone
Related items
Teams: Galaxy Training Network
Organizations: Galaxy
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