Fastq-to-bam @ NCI-Gadi Version 1
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Download RO-CrateFastq-to-BAM @ NCI-Gadi is a genome alignment workflow that takes raw FASTQ files, aligns them to a reference genome and outputs analysis ready BAM files. This workflow is designed for the National Computational Infrastructure's (NCI) Gadi supercompter, leveraging multiple nodes on NCI Gadi to run all stages of the workflow in parallel, either massively parallel using the scatter-gather approach or parallel by sample. It consists of a number of stages and follows the BROAD Institute's best practice recommendations.
Infrastructure_deployment_metadata: Gadi (NCI)
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Version 1 (earliest) Created 17th Aug 2021 at 05:45 by Georgina Samaha
Added/updated 2 files
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Creators and SubmitterCreators
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Andrey Bliznyuk, Ben Menadue, Rika Kobayashi, Matthew Downton, Yue Sun
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Views: 4233 Downloads: 330
Created: 17th Aug 2021 at 05:45
Last updated: 31st Sep 2022 at 00:23
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