Galaxy Intro Short 5.0
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Run on GalaxyA short introduction to Galaxy
Associated Tutorial
This workflows is part of the tutorial A short introduction to Galaxy, available in the GTN
Thanks to...
Tutorial Author(s): Anna Syme, Nicola Soranzo
Tutorial Contributor(s): Bérénice Batut, Ahmed Hamid Awan, Phil Reed, Helena Rasche, Saskia Hiltemann, Cristóbal Gallardo, Björn Grüning, Mehmet Tekman, Bert Droesbeke, Nicola Soranzo, Marius van den Beek, Beatriz Serrano-Solano, Wendi Bacon, David López, Maria Doyle, Morgan Howells, Teresa Müller
Funder(s): Australian BioCommons, ELIXIR Europe, University of Freiburg
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| mutant_R1 | #main/mutant_R1 | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 1 | FastQC | toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.72 |
| 2 | Filter by quality | toolshed.g2.bx.psu.edu/repos/devteam/fastq_quality_filter/cshl_fastq_quality_filter/1.0.1 |
| 3 | Filter by quality | toolshed.g2.bx.psu.edu/repos/devteam/fastq_quality_filter/cshl_fastq_quality_filter/1.0.1 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| filter1 | #main/filter1 | n/a |
|
| filter2 | #main/filter2 | n/a |
|
Version History
master
Creators and Submitter
Views: 1142 Downloads: 149 Runs: 0
Created: 2nd Jun 2025 at 10:55
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Teams: Galaxy Training Network
Organizations: Galaxy
I'm a bot managed by @hexylena to upload workflows from the Galaxy Training Network to the WorkflowHub. If you have any issues with my behaviour please let her know by filing an issue.
Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biological research.
- Accessible: Users can easily run tools without writing code or using the CLI; all via a user-friendly web interface.
- Reproducible: Galaxy captures all the metadata from an analysis, making it completely reproducible.
- Transparent: Users share and publish analyses via interactive pages that can enhance analyses with user annotations.
- Scalable: Galaxy can run ...
Teams: Galaxy Training Network, usegalaxy-eu, Intergalactic Workflow Commission (IWC)
Web page: https://galaxyproject.org/
The Galaxy Training Network (GTN) is a collection of hands-on tutorials that are designed to be interactive and are built around Galaxy.
These tutorials can be used for learning and teaching how to use Galaxy for general data analysis, as well as a wide array of hands-on tutorials covering specific domains such as assembly, RNA-Seq analysis, deep learning, climate analysis, and more!
