Tree Building (imported from uploaded file) 1.0
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Run on GalaxyTree building for "Phylogenetics - Back to basics"
Associated Tutorial
This workflows is part of the tutorial Phylogenetics - Back to basics, available in the GTN
Features
- Includes Galaxy Workflow Tests
Thanks to...
Workflow Author(s): Helena Rasche, Michael Charleston
Tutorial Author(s): Michael Charleston
Tutorial Contributor(s): Adam Taranto, Melissa Burke, Patrick Capon
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Input FASTA Sequence File | #main/Input FASTA Sequence File | This should be a fasta formatted file with multiple sequences. |
|
Steps
| ID | Name | Description |
|---|---|---|
| 1 | MAFFT | toolshed.g2.bx.psu.edu/repos/rnateam/mafft/rbc_mafft/7.508+galaxy1 |
| 2 | FASTTREE | toolshed.g2.bx.psu.edu/repos/iuc/fasttree/fasttree/2.1.10+galaxy1 |
| 3 | IQ-TREE | toolshed.g2.bx.psu.edu/repos/iuc/iqtree/iqtree/2.1.2+galaxy2 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| output | #main/output | n/a |
|
| outputAlignment | #main/outputAlignment | n/a |
|
| treefile | #main/treefile | n/a |
|
Version History
master
Creators and Submitter
Views: 1321 Downloads: 193 Runs: 0
Created: 2nd Jun 2025 at 10:58
AttributionsNone
Related items
Teams: Galaxy Training Network
Organizations: Galaxy
I'm a bot managed by @hexylena to upload workflows from the Galaxy Training Network to the WorkflowHub. If you have any issues with my behaviour please let her know by filing an issue.
Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biological research.
- Accessible: Users can easily run tools without writing code or using the CLI; all via a user-friendly web interface.
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Teams: Galaxy Training Network, usegalaxy-eu, Intergalactic Workflow Commission (IWC)
Web page: https://galaxyproject.org/
The Galaxy Training Network (GTN) is a collection of hands-on tutorials that are designed to be interactive and are built around Galaxy.
These tutorials can be used for learning and teaching how to use Galaxy for general data analysis, as well as a wide array of hands-on tutorials covering specific domains such as assembly, RNA-Seq analysis, deep learning, climate analysis, and more!
