GBIF data Quality check and filtering workflow Feb-2020 1.0
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Run on GalaxyCleaning GBIF data for the use in Ecology
Associated Tutorial
This workflows is part of the tutorial Cleaning GBIF data for the use in Ecology, available in the GTN
Thanks to...
Tutorial Author(s): Yvan Le Bras, Simon Benateau
Tutorial Contributor(s): Helena Rasche, Saskia Hiltemann, Yvan Le Bras
Funder(s): Pôle National de Données de Biodiversité
Steps
| ID | Name | Description |
|---|---|---|
| 0 | Get species occurrences data | toolshed.g2.bx.psu.edu/repos/ecology/spocc_occ/spocc_occ/0.9.0 |
| 1 | Filter | Filter1 |
| 2 | Count | Count1 |
| 3 | Summary Statistics | Summary_Statistics1 |
| 4 | Summary Statistics | Summary_Statistics1 |
| 5 | Filter | Filter1 |
| 6 | Filter | Filter1 |
| 7 | Count | Count1 |
| 8 | Filter | Filter1 |
| 9 | OGR2ogr | toolshed.g2.bx.psu.edu/repos/ecology/gdal_ogr2ogr/gdal_ogr2ogr/3.0.0 |
| 10 | OGR2ogr | toolshed.g2.bx.psu.edu/repos/ecology/gdal_ogr2ogr/gdal_ogr2ogr/3.0.0 |
Version History
master
Creators and Submitter
Views: 1316 Downloads: 180 Runs: 1
Created: 2nd Jun 2025 at 11:03
AttributionsNone
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Organizations: Galaxy
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