RNA Seq Counts To Genes 3.0
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Run on GalaxyRNA-seq counts to genes
Associated Tutorial
This workflows is part of the tutorial 2: RNA-seq counts to genes, available in the GTN
Thanks to...
Tutorial Author(s): Maria Doyle, Belinda Phipson, Jovana Maksimovic, Anna Trigos, Matt Ritchie, Harriet Dashnow, Shian Su, Charity Law
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| sampleinfo | sampleinfo | n/a |
|
| seqdata | seqdata | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 2 | Cut | toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cut_tool/1.1.0 |
| 3 | Merge Columns | toolshed.g2.bx.psu.edu/repos/devteam/merge_cols/mergeCols1/1.0.1 |
| 4 | Replace Text | toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_line/1.1.1 |
| 5 | Cut | toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cut_tool/1.1.0 |
| 6 | annotateMyIDs | toolshed.g2.bx.psu.edu/repos/iuc/annotatemyids/annotatemyids/3.5.0.1 |
| 7 | limma | toolshed.g2.bx.psu.edu/repos/iuc/limma_voom/limma_voom/3.34.9.9 |
Version History
master
Creators and Submitter
Views: 1326 Downloads: 191 Runs: 0
Created: 2nd Jun 2025 at 11:05
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Teams: Galaxy Training Network
Organizations: Galaxy
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