The Vertebrate Genomes Pipelines in Galaxy are intended to allow a user to generate high-quality near error-free assemblies of species from a user's own data or from the GenomeArk database.
SEEK ID: https://workflowhub.eu/collections/8
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VGP-meryldb-creation-trio/main
Create Meryl Database used for the estimation of assembly parameters and quality control with Merqury. - Added almost 2 years ago -
VGP hybrid scaffolding with Bionano optical maps
Scaffolding with BioNano data - Added almost 2 years ago -
VGP hybrid scaffolding with HiC data
Two versions of this workflow are available: (1) using Salsa2 and (2) using YAHS for scaffolding. We recommend using the YAHS version. - Added almost 2 years ago
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Created: 27th Jan 2023 at 11:51
Last updated: 27th Jan 2023 at 11:58
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