Workflows

What is a Workflow?
86 Workflows visible to you, out of a total of 87

Image Mass Cytometry analysis pipeline.

Type: Nextflow

Creator: Harshil Patel

Submitter: WorkflowHub Bot

Genes and transcripts annotation with Isoseq using uLTRA and TAMA

Type: Nextflow

Creator: Sébastien Guizard (@sguizard)

Submitter: WorkflowHub Bot

Deprecated

Compare DNA/RNA/protein sequences on k-mer content

Type: Nextflow

Creator: Olga Botvinnik

Submitter: WorkflowHub Bot

MARS-seq v2 preprocessing pipeline

Type: Nextflow

Creator: Martin Proks

Submitter: WorkflowHub Bot

MNase-seq analysis pipeline using BWA and DANPOS2.

Type: Nextflow

Creator: Harshil Patel

Submitter: WorkflowHub Bot

A pipeline to demultiplex, QC and map Nanopore data

Type: Nextflow

Creator: Chelsea Sawyer

Submitter: WorkflowHub Bot

Deprecated

De novo assembly pipeline for 10X linked-reads, used at the SciLifeLab National Genomics Infrastructure.

Type: Nextflow

Creator: Remi-Andre Olsen (@remiolsen)

Submitter: WorkflowHub Bot

Work-in-progress

Pre-processing of mass spectrometry-based metabolomics data

Type: Nextflow

Creators: Payam Emami, Payam Emami

Submitter: WorkflowHub Bot

ATACSeq peak-calling and differential analysis pipeline.

Type: Nextflow

Creators: Harshil Patel, Patel H, Langer B, Espinosa-Carrasco J, Syme R

Submitter: WorkflowHub Bot

A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences

Type: Nextflow

Creator: Anthony Underwood

Submitter: WorkflowHub Bot

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