Workflows
What is a Workflow?Filters
A pipeline for ortholog fetching and analysis
Nextflow rnafusion analysis pipeline, part of the nf-core community.
Precision HLA typing from next-generation sequencing data.
Type: Nextflow
Creators: Christopher Mohr, Alexander Peltzer, Sven Fillinger
Submitter: WorkflowHub Bot
Pipeline for the analysis of crispr data
Type: Nextflow
Creators: mirpedrol , mirpedrol , Júlia Mir Pedrol, mirpedrol , mirpedrol , Laurence Kuhlburger
Submitter: WorkflowHub Bot
Assembly and intrahost/low-frequency variant calling for viral samples
Type: Nextflow
Creators: Sarai Varona and Sara Monzon, Patel H, Varona S and Monzon S
Submitter: WorkflowHub Bot
Integration of viral sequences in genomic data
Small RNA-Seq Best Practice Analysis Pipeline.
Type: Nextflow
Creators: Phil Ewels <phil.ewels@scilifelab.se>, P. Ewels <phil.ewels@scilifelab.se>, P. Ewels, Chuan Wang <chuan.wang@scilifelab.se>, C. Wang <chuan.wang@scilifelab.se>, C. Wang, Rickard Hammarén <rickard.hammaren@scilifelab.se>, R. Hammarén <rickard.hammaren@scilifelab.se>, R. Hammarén, Lorena Pantano <lorena.pantano@gmail.com>, L. Pantano <lorena.pantano@gmail.com>, L. Pantano
Submitter: WorkflowHub Bot
SLAMseq analysis using Slamdunk with various T>C conversion quantifications and QC
An open-source analysis pipeline to detect germline or somatic variants from whole genome or targeted sequencing
