Workflows

Interpreting MaxQuant data using MSstats involves applying a rigorous statistical framework to glean meaningful insights from quantitative proteomic datasets

Associated Tutorial

This workflows is part of the tutorial Clinical Metaproteomics 5: Data Interpretation, available in the GTN

Thanks to...

Workflow Author(s): ...

A short introduction to Galaxy

Associated Tutorial

This workflows is part of the tutorial A short introduction to Galaxy, available in the GTN

Thanks to...

Tutorial Author(s): Anna Syme, Nicola Soranzo ...

Associated Tutorial

This workflows is part of the tutorial Assembly of metagenomic sequencing data, available in the GTN

Thanks to...

Tutorial Author(s): Polina Polunina, Bérénice Batut ...

Microbiome - Variant calling and Consensus Building

Associated Tutorial

This workflows is part of the tutorial Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition, available in the GTN

Features

• Includes Galaxy Workflow Tests ...

Galaxy Introduction Peaks2Genes - Part 1

Associated Tutorial

This workflows is part of the tutorial From peaks to genes, available in the GTN

Features

• Includes Galaxy Workflow Tests

Thanks to...

Tutorial Author(s): [Anne ...

Antibiotic resistance detection

Associated Tutorial

This workflows is part of the tutorial Antibiotic resistance detection, available in the GTN

Thanks to...

Tutorial Author(s): Willem de Koning, [Saskia ...

Analyses of metagenomics data - The global picture

Associated Tutorial

This workflows is part of the tutorial Analyses of metagenomics data - The global picture, available in the GTN

Features

• Includes Galaxy Workflow Tests

Thanks to...

**Tutorial ...

Introduction to Genomics and Galaxy

Associated Tutorial

This workflows is part of the tutorial Introduction to Genomics and Galaxy, available in the GTN

Thanks to...

Tutorial Author(s): Dave Clements, [Cristóbal ...

Generating a large database and then reducing it to a compact database using Metanovo

Associated Tutorial

This workflows is part of the tutorial Clinical Metaproteomics 1: Database-Generation, available in the GTN

Thanks to...

Workflow Author(s): Subina Mehta

Tutorial Author(s): [Subina ...

16S rRNA analysis with Nanopore reads

Associated Tutorial

This workflows is part of the tutorial 16S Microbial analysis with Nanopore data, available in the GTN

Thanks to...

Tutorial Author(s): Cristóbal Gallardo

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