Hiroshima University, Graduate School of Integrated Sciences for life, Laboratory of Genome Informatics, Ph.D student GitHub: https://github.com/yonesora56
Teams: RECETOX SpecDatRI, RECETOX, usegalaxy-eu, ELIXIR Metabolomics
Organizations: Masaryk University, RECETOX
https://orcid.org/0000-0001-6744-996X
Teams: Cimorgh IT solutions
Organizations: cimorgh IT
Teams: IBISBA Workflows, EOSC-Life WP3, NGFF Tools, Euro-BioImaging, AI4Life OC
Organizations: Unspecified, EMBL-EBI, Euro-BioImaging
https://orcid.org/0000-0002-5862-6132
I am a Ph.D. student in Gong lab. I am interested in cancer genomics, including the mining of genetic risk determinants in cancer, functional prediction of genetic variants, tumor-associated molecular epidemiology, large-scale data integration, analysis, and mining, as well as the construction of bioinformatical data platforms.
Dad, husband and PhD. Scientist, technologist and engineer. Bibliophile. Philomath. Passionate about science, medicine, research, computing and all things geeky!
Teams: Bioinformatics Innovation Lab
Organizations: Pondicherry University
https://orcid.org/0000-0003-4854-8238
Ph.D. Student at Department of Bioinformatics, Pondicherry University
Space: Independent Teams
Public web page: Not specified
ONT Artificial Deletion Filter-Delter
A tool to filter short artificial deletion variations by Oxford Nanopore Technologies (ONT) R9 and R10 flow cells and chemistries.
Requirements
The tool has been tested on Ubuntu 20.04 with 256GB RAM, 64 CPU cores and a NVIDIA GPU with 48GB RAM. The minimal requirements should be >= 64GB RAM and a NVIDIA GPU with >= 8GB RAM. Other operating systems like Windows or Mac were not tested.
ONT softwares like Guppy, ...
