Workflow Type: Galaxy
Frozen
Clinical Metaproteomics 4: Quantitation
Inputs
ID | Name | Description | Type |
---|---|---|---|
Experimental-Design Discovery MaxQuant | Experimental-Design Discovery MaxQuant | design file |
|
Input Raw-files | Input Raw-files | MSMS data |
|
Quantitation_Database-For-MaxQuant | Quantitation_Database-For-MaxQuant | Input protein database |
|
Steps
ID | Name | Description |
---|---|---|
3 | MaxQuant | Database searching toolshed.g2.bx.psu.edu/repos/galaxyp/maxquant/maxquant/2.0.3.0+galaxy0 |
4 | extracting microbial Proteins | extracting microbial Proteins Grep1 |
5 | extracting microbial Peptides | extracting microbial Peptides Grep1 |
6 | extract proteins | extract proteins Cut1 |
7 | extract peptides | extract peptides Cut1 |
8 | Quantified-Proteins | Quantified-Proteins Grouping1 |
9 | Quantified-Peptides | Quantified-Peptides Grouping1 |
Outputs
ID | Name | Description | Type |
---|---|---|---|
Quantified-Proteins | Quantified-Proteins | n/a |
|
Quantified-Peptides | Quantified-Peptides | n/a |
|
Version History
v0.1 (earliest) Created 7th Oct 2024 at 16:32 by WorkflowHub Bot
Updated to v0.1
Frozen
v0.1
0eb4332
Creators and Submitter
Creators
Not specifiedAdditional credit
GalaxyP
Submitter
Tool
Activity
Views: 530 Downloads: 42 Runs: 0
Created: 3rd Oct 2024 at 03:03
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