Molecular formula assignment and recalibration with MFAssignR package. 1.0
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Run on GalaxyThis workflow can be used to assign multi-element molecular formulas to ultrahigh resolution mass spectra.
Associated Tutorial
This workflows is part of the tutorial Molecular formula assignment and mass recalibration with MFAssignR package, available in the GTN
Features
- Includes Galaxy Workflow Tests
- Includes a Galaxy Workflow Report
- Uses Galaxy Workflow Comments
Thanks to...
Workflow Author(s): RECETOX, MUNI, Kristina Gomoryova, Helge Hecht
Tutorial Author(s): Kristina Gomoryova, Helge Hecht, Simeon Schum
Tutorial Contributor(s): Helge Hecht, Kristina Gomoryova, Saskia Hiltemann
Steps
| ID | Name | Description |
|---|---|---|
| 1 | MFAssignR KMDNoise | toolshed.g2.bx.psu.edu/repos/recetox/mfassignr_kmdnoise/mfassignr_kmdnoise/1.1.1+galaxy0 |
| 2 | MFAssignR HistNoise | toolshed.g2.bx.psu.edu/repos/recetox/mfassignr_histnoise/mfassignr_histnoise/1.1.1+galaxy0 |
| 3 | MFAssignR SNplot | toolshed.g2.bx.psu.edu/repos/recetox/mfassignr_snplot/mfassignr_snplot/1.1.1+galaxy0 |
| 4 | MFAssignR IsoFiltR | toolshed.g2.bx.psu.edu/repos/recetox/mfassignr_isofiltr/mfassignr_isofiltr/1.1.1+galaxy0 |
| 5 | MFAssignR MFAssignCHO | toolshed.g2.bx.psu.edu/repos/recetox/mfassignr_mfassigncho/mfassignr_mfassignCHO/1.1.1+galaxy0 |
| 6 | MFAssignR RecalList | toolshed.g2.bx.psu.edu/repos/recetox/mfassignr_recallist/mfassignr_recallist/1.1.1+galaxy0 |
| 7 | MFAssignR FindRecalSeries | toolshed.g2.bx.psu.edu/repos/recetox/mfassignr_findrecalseries/mfassignr_findRecalSeries/1.1.2+galaxy1 |
| 8 | MFAssignR Recal | toolshed.g2.bx.psu.edu/repos/recetox/mfassignr_recal/mfassignr_recal/1.1.1+galaxy0 |
| 9 | MFAssignR MFAssign | toolshed.g2.bx.psu.edu/repos/recetox/mfassignr_mfassign/mfassignr_mfassign/1.1.1+galaxy0 |
Version History
master
Creators and Submitter
Views: 1198 Downloads: 156 Runs: 0
Created: 2nd Jun 2025 at 11:00
AttributionsNone
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Organizations: Galaxy
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