Sentinel 2 example
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This workflows is part of the tutorial Sentinel 2 biodiversity, available in the GTN
Features
- Includes Galaxy Workflow Tests
Thanks to...
Workflow Author(s): Marie Josse
Tutorial Author(s): Marie Josse, Yvan Le Bras
Tutorial Contributor(s): Helena Rasche, Saskia Hiltemann, Wendi Bacon, Yvan Le Bras
Funder(s): Pôle National de Données de Biodiversité
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| SENTINEL2A_20230214-105638-781_L2A_T31UET_D.zip | #main/SENTINEL2A_20230214-105638-781_L2A_T31UET_D.zip | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 1 | Preprocess sentinel 2 data | toolshed.g2.bx.psu.edu/repos/ecology/srs_preprocess_s2/srs_preprocess_s2/0.0.1 |
| 2 | Compute spectral indices | toolshed.g2.bx.psu.edu/repos/ecology/srs_spectral_indices/srs_spectral_indices/0.0.1 |
| 3 | Compute biodiversity indices | toolshed.g2.bx.psu.edu/repos/ecology/srs_global_indices/srs_global_indices/0.0.1 |
| 4 | Map diversity | toolshed.g2.bx.psu.edu/repos/ecology/srs_diversity_maps/srs_diversity_maps/0.0.1 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| _anonymous_output_1 | #main/_anonymous_output_1 | n/a |
|
| _anonymous_output_2 | #main/_anonymous_output_2 | n/a |
|
| _anonymous_output_3 | #main/_anonymous_output_3 | n/a |
|
| _anonymous_output_4 | #main/_anonymous_output_4 | n/a |
|
| _anonymous_output_5 | #main/_anonymous_output_5 | n/a |
|
| _anonymous_output_6 | #main/_anonymous_output_6 | n/a |
|
| _anonymous_output_7 | #main/_anonymous_output_7 | n/a |
|
| _anonymous_output_8 | #main/_anonymous_output_8 | n/a |
|
| _anonymous_output_9 | #main/_anonymous_output_9 | n/a |
|
Version History
Version 2 (latest) Created 28th Jul 2025 at 13:10 by Armin Dadras
Updated the authors list.
Frozen
Version-2978d766
Creators and Submitter
Views: 1378 Downloads: 259 Runs: 1
Created: 2nd Jun 2025 at 11:03
Last updated: 28th Jul 2025 at 09:55
AttributionsNone
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These tutorials can be used for learning and teaching how to use Galaxy for general data analysis, as well as a wide array of hands-on tutorials covering specific domains such as assembly, RNA-Seq analysis, deep learning, climate analysis, and more!
Collection of workflows used or developed by the EuroScienceGateway project.
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