Marine Omics visualisation 2.0
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Run on GalaxyFrom Obis data to Biodiversity indicators
Associated Tutorial
This workflows is part of the tutorial Obis marine indicators, available in the GTN
Features
- Includes Galaxy Workflow Tests
Thanks to...
Workflow Author(s): Marie Jossé
Tutorial Author(s): Marie Josse, Yvan Le Bras
Tutorial Contributor(s): Helena Rasche, Marie Josse, Yvan Le Bras, Saskia Hiltemann, Björn Grüning
Funder(s): Pôle National de Données de Biodiversité
Grants(s): Gallantries: Bridging Training Communities in Life Science, Environment and Health, Fair-Ease, EuroScienceGateway
Steps
| ID | Name | Description |
|---|---|---|
| 0 | OBIS occurences | toolshed.g2.bx.psu.edu/repos/ecology/obis_data/obis_data/0.0.2 |
| 1 | Advanced Cut | toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cut_tool/9.3+galaxy0 |
| 2 | Ocean biodiversity indicators | toolshed.g2.bx.psu.edu/repos/ecology/obisindicators/obisindicators/0.0.2 |
Version History
master
Creators and Submitter
Views: 1223 Downloads: 183 Runs: 0
Created: 2nd Jun 2025 at 11:04
Last updated: 28th Jul 2025 at 11:17
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Teams: Galaxy Training Network
Organizations: Galaxy
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EuroScienceGateway will leverage a distributed computing network across 13 European countries, accessible via 6 national, user-friendly web portals, facilitating access to compute and storage infrastructures across Europe as well as to data, tools, workflows and services that can be customized to suit researchers’ needs.EuroScienceGateway will deliver a robust, scalable, seamlessly integrated open infrastructure for data-driven research, contributing an innovative and customizable service for ...
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Start date: 1st Oct 2022
End date: 31st Aug 2025
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These tutorials can be used for learning and teaching how to use Galaxy for general data analysis, as well as a wide array of hands-on tutorials covering specific domains such as assembly, RNA-Seq analysis, deep learning, climate analysis, and more!
Collection of workflows used or developed by the EuroScienceGateway project.
Maintainers: Stian Soiland-Reyes, Paul De Geest, Eli Chadwick, Armin Dadras
Number of items: 48
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