Workflows
What is a Workflow?Filters
Workflow for the Galaxy Training Network tutorial "Hybrid genome assembly - Nanopore and Illumina"
Associated Tutorial
This workflows is part of the tutorial Hybrid genome assembly - Nanopore and Illumina, available in the GTN
Features
- Includes Galaxy Workflow Tests ...
Visualize and filter scATAC-seq anndata to produce a high quality count matrix
Associated Tutorial
This workflows is part of the tutorial Pre-processing of 10X Single-Cell ATAC-seq Datasets, available in the GTN
Features
- Includes Galaxy Workflow Tests ...
This workflow creates an count matrix anndata file given 10x scATAC-seq data.
Associated Tutorial
This workflows is part of the tutorial Pre-processing of 10X Single-Cell ATAC-seq Datasets, available in the GTN
Features
- Includes Galaxy Workflow Tests ...
Text mining a museum collection in tabular format to extract from which year most objects derive and what they are.
Associated Tutorial
This workflows is part of the tutorial OpenRefine Tutorial for researching cultural data, available in the GTN
Features
- Includes [Galaxy Workflow ...
To perform Qualification, Nitrate Calibration, Validation of One Argo float or One Glider by using Neural Network and Climatology. Copy past before running and change calibration parametrization if necessary
Associated Tutorial
This workflows is part of the tutorial Nitrate DMQC for autonomous platforms such as Argo floats, available in the GTN ...
The workflow serves as a short introduction to Galaxy for users from the Humanities who mostly work with texts. The workflow compares two texts, visualises the differences with 'diff' and a wordcloud and extracts selected passaged for further analysis.
Associated Tutorial
This workflows is part of the tutorial Introduction to Digital Humanities in Galaxy, available in ...
This workflow shows Flexynesis usage for predicting survival markers from a multi-omics dataset
Associated Tutorial
This workflows is part of the tutorial Identifing Survival Markers of Brain tumor with Flexynesis, available in the GTN
Features
- Includes Galaxy Workflow Tests ...
This WF applies Flexynesis on BRCA data from Metabric for a classification task
Associated Tutorial
This workflows is part of the tutorial Modeling Breast Cancer Subtypes with Flexynesis, available in the GTN
Features
- Includes Galaxy Workflow Tests ...
Classification and visualization of ITS regions.
Associated Tutorial
This workflows is part of the tutorial MGnify v5.0 Amplicon Pipeline, available in the GTN
Features
- Includes a Galaxy Workflow Report
- Uses ...
The MAPseq to Ampvis workflow processes MAPseq OTU tables and associated metadata for analysis in Ampvis2. This workflow involves reformatting MAPseq output datasets to produce structured output files suitable for Ampvis2.
Associated Tutorial
This workflows is part of the tutorial MGnify v5.0 Amplicon Pipeline, available in the GTN
Features
...
