Functional annotation
1.0

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Workflow Type: Galaxy

Stable

Functional annotation of protein sequences

Associated Tutorial

This workflows is part of the tutorial Functional annotation of protein sequences, available in the GTN

Features

Includes Galaxy Workflow Tests

Thanks to...

Workflow Author(s): Anthony Bretaudeau

Tutorial Author(s): Anthony Bretaudeau

Tutorial Contributor(s): Helena Rasche, Björn Grüning, Saskia Hiltemann, Bérénice Batut

Funder(s): ELIXIR Europe, Institut Français de Bioinformatique

Grants(s): Gallantries: Bridging Training Communities in Life Science, Environment and Health, EuroScienceGateway

SEEK ID: https://workflowhub.eu/workflows/1521?version=1

DOI: 10.48546/workflowhub.workflow.1521.1

Inputs

ID	Name	Description	Type
Protein sequences	#main/Protein sequences	Some protein sequences to functionally annotate	File

Steps

ID	Name	Description
1	eggNOG Mapper	toolshed.g2.bx.psu.edu/repos/galaxyp/eggnog_mapper/eggnog_mapper/2.1.8+galaxy3
2	InterProScan	toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.59-91.0+galaxy3

Outputs

ID	Name	Description	Type
_anonymous_output_1	#main/_anonymous_output_1	n/a	File
_anonymous_output_2	#main/_anonymous_output_2	n/a	File

Version History

1.0 (earliest) Created 2nd Jun 2025 at 10:57 by GTN Bot

No revision comments

Frozen 1.0 d357c94

Creators and Submitter

Creator

Anthony Bretaudeau

Submitter

GTN Bot

Discussion Channel

GTN Matrix

Tools

eggNOG-mapper v2

InterProScan (EBI)

Citation

Bretaudeau, A. (2025). Functional annotation. WorkflowHub. https://doi.org/10.48546/WORKFLOWHUB.WORKFLOW.1521.1

License

GNU General Public License v3.0 or later (GPL-3.0-or-later)

Activity

Views: 1454 Downloads: 185 Runs: 0

Created: 2nd Jun 2025 at 10:57

Last updated: 28th Jul 2025 at 10:55

Functional annotation 1.0