EuroScienceGateway MS3: Initial EuroScienceGateway workflows registered
View Publication
Export 
BiBTeXWorkflowHub is a registry of computational workflows, provided as a EOSC Service by ELIXIR-UK, and used by over 200 different research projects, institutions and virtual collaborations. For this milestone of EuroScienceGateway (ESG), the project has developed an onboarding guide for WorkflowHub and registered in WorkflowHub the initial ESG workflows that have been developed and maintained by the project.
SEEK ID: https://workflowhub.eu/publications/44
Teams: EuroScienceGateway
Publication type: Tech report
Publisher: Zenodo
Citation: https://doi.org/10.5281/zenodo.10728922
Date Published: 29th Feb 2024
URL: https://doi.org/10.5281/zenodo.10728922
Registered Mode: imported from a bibtex file
Export PNG
Download
Submitter
Views: 77
Created: 3rd Oct 2025 at 15:22
Tags AttributionsNone
Related items
Teams: IBISBA Workflows, GalaxyProject SARS-CoV-2, BioBB Building Blocks, Common Workflow Language (CWL) community, BioExcel Best Practice Guides, Specimen Data Refinery, FAIR Computational Workflows, Vertebrate Genomes Pipelines in Galaxy, TRE-FX, EuroScienceGateway, Biodiversity Genomics Europe (general), BY-COVID Baseline Use Case: SARS-CoV-2 Vaccine(s) effectiveness in preventing SARS-CoV-2 infection, BY-COVID (general), BioDT additional pipelines, BioDT Use Case 4.1.1.1 Biodiversity dynamics, BioDT Use Case 4.1.2.2 DNA detected biodiversity, poorly known habitats, BioDT Use Case 4.1.2.1 Crop wild relatives and genetic resources for food security, BioDT Use Case 4.1.3.1 Invasive species, BioDT Use Case 4.1.3.2 Endangered species, BioDT Use Case 4.1.4.1 Disease outbreaks, BioDT Use Case 4.1.4.2 Pollinators, BioDT Use Case 4.1.1.2 Ecosystem services, ELIXIR Training, ELIXIR Tools platform, EOSC4Cancer, Workflow Run Crate working group
Organizations: The University of Manchester, ELIXIR-UK
https://orcid.org/0000-0001-9842-9718
ELIXIR is an intergovernmental organisation that brings together life science resources from across Europe. These resources include databases, software tools, training materials, cloud storage and supercomputers.
The goal of ELIXIR is to coordinate these resources so that they form a single infrastructure. This infrastructure makes it easier for scientists to find and share data, exchange expertise, and agree on best practices. Ultimately, it will help them gain new insights into how living ...
Teams: ELIXIR Training, FAIR Computational Workflows, EuroScienceGateway, BY-COVID (general), ELIXIR Tools platform, ELIXIR Metabolomics
Web page: https://elixir-europe.org/
EuroScienceGateway will leverage a distributed computing network across 13 European countries, accessible via 6 national, user-friendly web portals, facilitating access to compute and storage infrastructures across Europe as well as to data, tools, workflows and services that can be customized to suit researchers’ needs.EuroScienceGateway will deliver a robust, scalable, seamlessly integrated open infrastructure for data-driven research, contributing an innovative and customizable service for ...
Space: ELIXIR
Public web page: https://eurosciencegateway.eu/
Start date: 1st Oct 2022
End date: 31st Aug 2025
Protype demonstrator of a workflow reducing HESS and INTEGRAL/SPI-ACS data to common Light Curve format and combining the lightcurves into a multi-wavelength observation.
Type: Galaxy
Creators: Volodymyr Savchenko, Denys Savchenko, Andrii Neronov
Submitter: Volodymyr Savchenko
Refining Genome Annotations with Apollo
NDVI data with OpenEO to time series visualisation with HoloViz
Calculating and visualizing marine biodiversity indicators
Finding potential muon stopping sites in crystalline copper
Type: Galaxy
Creators: Leandro Liborio, Muon Spectroscopy Computational Project
Submitter: Paul De Geest
From Copernicus Sentinel 5P data to panoply visualization of volcanic activity impact to atmosphere
Functional annotation of protein sequences
Structural and functional genome annotation with Funannotate
Masking repeats in a genome using RepeatMasker
