functional-annotation-protein-sequences/main v0.1
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Run on GalaxyThis workflow uses eggNOG mapper and InterProScan for functional annotation of protein sequences.
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| input | #main/input | This workflow uses eggNOG mapper and Interproscan for functional annotation of protein sequences. |
|
Steps
| ID | Name | Description |
|---|---|---|
| 1 | InterProScan | InterProScan is a tool that analyses each protein sequence from our annotation to determine if they contain one or several of the signatures from InterPro. toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.59-91.0+galaxy3 |
| 2 | eggNOG Mapper | EggNOG Mapper compares each protein sequence of the annotation to a huge set of ortholog groups from the EggNOG database. toolshed.g2.bx.psu.edu/repos/galaxyp/eggnog_mapper/eggnog_mapper/2.1.8+galaxy4 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| eggNOG Mapper annotations | #main/eggNOG Mapper annotations | n/a |
|
| eggNOG Mapper seed_orthologs | #main/eggNOG Mapper seed_orthologs | n/a |
|
| interproscan tabular | #main/interproscan tabular | n/a |
|
| interproscan xml | #main/interproscan xml | n/a |
|
Version History
v0.1 (earliest) Created 31st Jan 2025 at 03:01 by WorkflowHub Bot
Updated to v0.1
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v0.1c0a12c6
Creators and SubmitterViews: 2251 Downloads: 1520 Runs: 0
Created: 31st Jan 2025 at 03:01
Last updated: 18th Aug 2025 at 16:39
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The Intergalactic Workflow Commission releases vetted analysis pipelines for the Galaxy platform.
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Collection of workflows used or developed by the EuroScienceGateway project.
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