functional-annotation-protein-sequences/main
v0.1

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Workflow Type: Galaxy

This workflow uses eggNOG mapper and InterProScan for functional annotation of protein sequences.

SEEK ID: https://workflowhub.eu/workflows/1262?version=1

Inputs

ID Name Description Type
input #main/input This workflow uses eggNOG mapper and Interproscan for functional annotation of protein sequences.
  • File

Steps

ID Name Description
1 InterProScan InterProScan is a tool that analyses each protein sequence from our annotation to determine if they contain one or several of the signatures from InterPro. toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.59-91.0+galaxy3
2 eggNOG Mapper EggNOG Mapper compares each protein sequence of the annotation to a huge set of ortholog groups from the EggNOG database. toolshed.g2.bx.psu.edu/repos/galaxyp/eggnog_mapper/eggnog_mapper/2.1.8+galaxy4

Outputs

ID Name Description Type
eggNOG Mapper annotations #main/eggNOG Mapper annotations n/a
  • File
eggNOG Mapper seed_orthologs #main/eggNOG Mapper seed_orthologs n/a
  • File
interproscan tabular #main/interproscan tabular n/a
  • File
interproscan xml #main/interproscan xml n/a
  • File

Version History

v0.1 (earliest) Created 31st Jan 2025 at 03:01 by WorkflowHub Bot

Updated to v0.1


Frozen v0.1 c0a12c6
help Creators and Submitter
Creators
Submitter
Tools
InterProScan (EBI)
eggNOG-mapper v2
License
MIT License
Activity

Views: 35   Downloads: 8   Runs: 0

Created: 31st Jan 2025 at 03:01

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