Workflow Type: Nextflow
Frozen
Work-in-progress
Workflow to download and prepare TCGA data.
The workflow divides the process of generating Gene Regulatory networks from TCGA cancer data in three steps:
- Downloading the raw data from GDC and saving the rds/tables needed later
- Preparing the data. This step includes filtering the data, normalizing it...
- Analysis of gene regulatory networks
Version History
main @ b7cb7f8 (earliest) Created 18th Feb 2025 at 20:38 by Viola Fanfani
Merge pull request #10 from katehoffshutta/main
updates to run test cases
Frozen
main
b7cb7f8
Creators and SubmitterCreator
Submitter
Activity
Views: 1491 Downloads: 350
Created: 18th Feb 2025 at 20:38
Tags
AttributionsNone
View on GitHub
https://orcid.org/0000-0003-3852-6908