Workflow Type: Galaxy
Open
Genome assembly: Unicycler-based WF for Klebsiella pneumoniae [Wick et al. Microbial genomics 2017]
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| 8811145 | https://ndownloader.figshare.com/files/8811145 | n/a |
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| 8811148 | https://ndownloader.figshare.com/files/8811148 | n/a |
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| 8812159 | https://ndownloader.figshare.com/files/8812159 | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 3 | Create assemblies with Unicycler | toolshed.g2.bx.psu.edu/repos/iuc/unicycler/unicycler/0.4.6.0 |
| 4 | spades | toolshed.g2.bx.psu.edu/repos/nml/spades/spades/1.2 |
| 5 | Create assemblies with Unicycler | toolshed.g2.bx.psu.edu/repos/iuc/unicycler/unicycler/0.4.6.0 |
| 6 | Create assemblies with Unicycler | toolshed.g2.bx.psu.edu/repos/iuc/unicycler/unicycler/0.4.6.0 |
| 7 | Bandage Image | toolshed.g2.bx.psu.edu/repos/iuc/bandage/bandage_image/0.8.1+galaxy0 |
| 8 | Bandage Info | toolshed.g2.bx.psu.edu/repos/iuc/bandage/bandage_info/0.8.1+galaxy0 |
| 9 | Bandage Image | toolshed.g2.bx.psu.edu/repos/iuc/bandage/bandage_image/0.8.1+galaxy0 |
| 10 | Bandage Info | toolshed.g2.bx.psu.edu/repos/iuc/bandage/bandage_info/0.8.1+galaxy0 |
| 11 | Bandage Image | toolshed.g2.bx.psu.edu/repos/iuc/bandage/bandage_image/0.8.1+galaxy0 |
| 12 | Bandage Info | toolshed.g2.bx.psu.edu/repos/iuc/bandage/bandage_info/0.8.1+galaxy0 |
Version History
Version 1 (earliest) Created 5th Aug 2020 at 14:03 by Willem de Koning
Added/updated 1 files
Open
master
5bb0fa6
Creators and SubmitterCreators
Not specifiedAdditional credit
Milad Miladi
Submitter
License
Activity
Views: 7208 Downloads: 738 Runs: 0
Created: 5th Aug 2020 at 14:03
Tags
AttributionsNone
Run on Galaxy
https://orcid.org/0000-0002-4594-8423