Workflows

What is a Workflow?
1298 Workflows visible to you, out of a total of 1381

This workflow is developed for automatic detection and measuring of mitoflashes in time-lapse microscopy images.

In addition, this workflow can be used for detection and tracking of other spot-like organelles with small motion.

If this workflow helped with the analysis of your data, please do not forget to cite: https://doi.org/10.1097/j.pain.0000000000002642

Associated Tutorial

This workflows is part of the tutorial [Tracking of mitochondria and capturing ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

This workflow runs 3 comparisons using MuSiC Deconvolution compare: where datasets cell compositions are inferred from a reference containing healthy and diseased cells; where diseased are inferred from disease and healthy from healthy; and where both diseased and healthy are inferred from a healthy reference.

Associated Tutorial

This workflows is part of the tutorial Comparing inferred cell compositions using MuSiC deconvolution, ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Genome annotation with Prokka

Associated Tutorial

This workflows is part of the tutorial Genome annotation with Prokka, available in the GTN

Features

Thanks to...

Workflow Author(s): Anna Syme, Torsten ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Nanopore datasets analysis - Phylogenetic Identification - antibiotic resistance genes detection and contigs building

Associated Tutorial

This workflows is part of the tutorial Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition, available in the GTN

Features

  • Includes ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Filter, Plot and Explore Single-cell RNA-seq Data

Associated Tutorial

This workflows is part of the tutorial Filter, plot and explore single-cell RNA-seq data with Scanpy, available in the GTN

Features

Thanks

...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Pre-processing of Single-Cell RNA Data

Associated Tutorial

This workflows is part of the tutorial Pre-processing of Single-Cell RNA Data, available in the GTN

Thanks to...

Tutorial Author(s): Mehmet Tekman, [Bérénice ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Galaxy 101

Associated Tutorial

This workflows is part of the tutorial Galaxy Basics for genomics, available in the GTN

Features

Type: Galaxy

Creators: None

Submitter: GTN Bot

Pre-processing of Single-Cell RNA Data

Associated Tutorial

This workflows is part of the tutorial Pre-processing of Single-Cell RNA Data, available in the GTN

Features

Thanks to...

Tutorial Author(s): [Mehmet ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Updated tool versions Aug 24 2022

Associated Tutorial

This workflows is part of the tutorial Filter, plot and explore single-cell RNA-seq data with Scanpy, available in the GTN

Features

Type: Galaxy

Creators: None

Submitter: GTN Bot

introduction

Associated Tutorial

This workflows is part of the tutorial How to reproduce published Galaxy analyses, available in the GTN

Thanks to...

Tutorial Author(s): Melanie Föll, Anne Fouilloux ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

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