Workflow Type: Galaxy
Open
Work-in-progress
Just the cleaning then assembly of all reads. TO explore further follow one of the paths described in "Global view" (WF 0)
Steps
ID | Name | Description |
---|---|---|
0 | fastp: clean reads | toolshed.g2.bx.psu.edu/repos/iuc/fastp/fastp/0.20.1+galaxy0 |
1 | Shovill | toolshed.g2.bx.psu.edu/repos/iuc/shovill/shovill/1.1.0+galaxy0 |
Outputs
ID | Name | Description | Type |
---|---|---|---|
_anonymous_output_1 | _anonymous_output_1 | n/a |
|
fastp on input dataset(s): HTML report | fastp on input dataset(s): HTML report | n/a |
|
fastp on input dataset(s): Read 1 output | fastp on input dataset(s): Read 1 output | n/a |
|
Shovill on input dataset(s) Log file | Shovill on input dataset(s) Log file | n/a |
|
Shovill on input dataset(s): Contigs | Shovill on input dataset(s): Contigs | n/a |
|
Version History
Version 1 (earliest) Created 4th Feb 2021 at 09:11 by johan Rollin
Added/updated 1 files
Open
master
bcc033e
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Activity
Views: 3876 Downloads: 271 Runs: 0
Created: 4th Feb 2021 at 09:11
Last updated: 10th Feb 2023 at 10:06
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