BioTranslator Workflow
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Run on GalaxyBioTranslator performs sequentially pathway analysis and gene prioritization: A specific operator is executed for each task to translate the input gene set into semantic terms and pinpoint the pivotal-role genes on the derived semantic network. The output consists of the set of statistically significant semantic terms and the associated hub genes (the gene signature), prioritized according to their involvement in the underlying semantic topology.
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Input Gene List | Input Gene List | Insert a gene list (gene symbols or ensembl gene ids) as a .txt file. |
|
Steps
| ID | Name | Description |
|---|---|---|
| 1 | BioTranslator | biotranslator_lite |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| GO Heatmap | GO Heatmap | n/a |
|
| GO Gene Prioritization | GO Gene Prioritization | n/a |
|
| GO Enriched Terms | GO Enriched Terms | n/a |
|
Version History
Version 1 (earliest) Created 15th Sep 2021 at 18:27 by thodk
Added/updated 2 files
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Creators and SubmitterViews: 5240 Downloads: 601 Runs: 1
Created: 15th Sep 2021 at 18:27
Last updated: 24th Sep 2021 at 16:16
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Teams: CO2MICS Lab
Organizations: Biomedical Research Foundation (BRFAA) of the Academy of Athens
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