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COnSensus Interaction Network InFErence Service
Inference framework for reconstructing networks using a consensus approach between multiple methods and data sources.
Reference
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Inputs
ID | Name | Description | Type |
---|---|---|---|
data_matrix | n/a | Gene expression data matrix |
|
gmt_filepath | n/a | Optional GMT file to perform inference on multiple gene sets |
|
index_col | n/a | Column index in the data. Defaults to None, a.k.a., no index |
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outdir | n/a | Path to the output directory |
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separator | n/a | Separator for the data. Defaults to . |
|
samples_on_rows | n/a | Flag that indicates that data contain the samples on rows. Defaults to False. |
|
Steps
ID | Name | Description |
---|---|---|
cosifer | n/a | n/a |
Outputs
ID | Name | Description | Type |
---|---|---|---|
resdir | n/a | n/a |
|
Version History
Version 1 (earliest) Created 5th May 2021 at 16:50 by Laura Rodriguez-Navas
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Views: 4425 Downloads: 262
Created: 5th May 2021 at 16:50
Last updated: 21st Apr 2023 at 11:50
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